Scorri Autori Unibg
GPU-powered evolutionary design of mass-action-based models of gene regulation
2016-01-01 Nobile, Marco S.; Cipolla, Davide; Cazzaniga, Paolo; Besozzi, Daniela
GPU-powered Bat Algorithm for the parameter estimation of biochemical kinetic values
2016-01-01 Tangherloni, Andrea; Nobile, Marco S.; Cazzaniga, Paolo
GPU-powered and settings-free parameter estimation of biochemical systems
2016-01-01 Nobile, Marco S.; Tangherloni, Andrea; Besozzi, Daniela; Cazzaniga, Paolo
Graphics processing units in bioinformatics, computational biology and systems biology
2017-01-01 Nobile, Marco S; Cazzaniga, Paolo; Tangherloni, Andrea; Besozzi, Daniela
GPU-powered model analysis with PySB/cupSODA
2017-01-01 Harris, Leonard A; Nobile, Marco S; Pino, James C; Lubbock, Alexander L. R; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo; Lopez, Carlos F.
COSYS: A computational infrastructure for systems biology
2017-01-01 Cumbo, Fabio; Nobile, Marco S.; Damiani, Chiara; Colombo, Riccardo; Mauri, Giancarlo; Cazzaniga, Paolo
Reboot strategies in particle swarm optimization and their impact on parameter estimation of biochemical systems
2017-01-01 Spolaor, Simone; Tangherloni, Andrea; Rundo, Leonardo; Nobile, Marco S.; Cazzaniga, Paolo
Efficient simulation of reaction systems on graphics processing units
2017-01-01 Nobile, Marco S.; Porreca, Antonio E.; Spolaor, Simone; Manzoni, Luca; Cazzaniga, Paolo; Mauri, Giancarlo; Besozzi, Daniela
Gillespie’s Stochastic Simulation Algorithm on MIC coprocessors
2017-01-01 Tangherloni, Andrea; Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Mauri, Giancarlo
LASSIE: simulating large-scale models of biochemical systems on GPUs
2017-05-10 Tangherloni, Andrea; Nobile, Marco S.; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization
2018-01-01 Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Colombo, Riccardo; Mauri, Giancarlo; Pasi, Gabriella
Computational Intelligence for Parameter Estimation of Biochemical Systems
2018-01-01 Nobile, Marco S.; Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo
GPU-Powered Multi-Swarm Parameter Estimation of Biological Systems: A Master-Slave Approach
2018-01-01 Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Cazzaniga, Paolo; Nobile, Marco S.
GPU Accelerated Analysis of Treg-Teff Cross Regulation in Relapsing-Remitting Multiple Sclerosis
2019-01-01 Beccuti, Marco; Cazzaniga, Paolo; Pennisi, Marzio; Besozzi, Daniela; Nobile, Marco S.; Pernice, Simone; Russo, Giulia; Tangherloni, Andrea; Pappalardo, Francesco
High Performance Computing for Haplotyping: Models and Platforms
2019-01-01 Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Nobile, Marco S.; Merelli, Ivan; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo; Liò, Pietro
HaraliCU: GPU-powered Haralick feature extraction on medical images exploiting the full dynamics of gray-scale levels
2019-01-01 Rundo, Leonardo; Tangherloni, Andrea; Galimberti, Simone; Cazzaniga, Paolo; Woitek, Ramona; Sala, Evis; Nobile, Marco S.; Mauri, Giancarlo
Biochemical parameter estimation vs. benchmark functions: A comparative study of optimization performance and representation design
2019-01-01 Tangherloni, Andrea; Spolaor, Simone; Cazzaniga, Paolo; Besozzi, Daniela; Rundo, Leonardo; Mauri, Giancarlo; Nobile, Marco S.
Modeling cell proliferation in human acute myeloid leukemia xenografts
2019-01-01 Nobile, Marco S.; Vlachou, Thalia; Spolaor, Simone; Bossi, Daniela; Cazzaniga, Paolo; Lanfrancone, Luisa; Mauri, Giancarlo; Pelicci, Pier Giuseppe; Besozzi, Daniela
ginSODA: massive parallel integration of stiff ODE systems on GPUs
2019-01-01 Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Mauri, Giancarlo
Dilation Functions in Global Optimization
2019-01-01 Nobile, Marco S.; Cazzaniga, Paolo; Ashlock, Daniel A.
Data di pubblicazione | Titolo | Autore/i | Tipologia | Documento allegato |
---|---|---|---|---|
1-gen-2016 | GPU-powered evolutionary design of mass-action-based models of gene regulation | Nobile, Marco S.; Cipolla, Davide; Cazzaniga, Paolo; Besozzi, Daniela | 1.2 Contributi in volume - Book chapters::1.2.01 Contributi in volume (Capitoli o Saggi) - Book Chapters/Essays | |
1-gen-2016 | GPU-powered Bat Algorithm for the parameter estimation of biochemical kinetic values | Tangherloni, Andrea; Nobile, Marco S.; Cazzaniga, Paolo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2016 | GPU-powered and settings-free parameter estimation of biochemical systems | Nobile, Marco S.; Tangherloni, Andrea; Besozzi, Daniela; Cazzaniga, Paolo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2017 | Graphics processing units in bioinformatics, computational biology and systems biology | Nobile, Marco S; Cazzaniga, Paolo; Tangherloni, Andrea; Besozzi, Daniela | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2017 | GPU-powered model analysis with PySB/cupSODA | Harris, Leonard A; Nobile, Marco S; Pino, James C; Lubbock, Alexander L. R; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo; Lopez, Carlos F. | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2017 | COSYS: A computational infrastructure for systems biology | Cumbo, Fabio; Nobile, Marco S.; Damiani, Chiara; Colombo, Riccardo; Mauri, Giancarlo; Cazzaniga, Paolo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2017 | Reboot strategies in particle swarm optimization and their impact on parameter estimation of biochemical systems | Spolaor, Simone; Tangherloni, Andrea; Rundo, Leonardo; Nobile, Marco S.; Cazzaniga, Paolo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2017 | Efficient simulation of reaction systems on graphics processing units | Nobile, Marco S.; Porreca, Antonio E.; Spolaor, Simone; Manzoni, Luca; Cazzaniga, Paolo; Mauri, Giancarlo; Besozzi, Daniela | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2017 | Gillespie’s Stochastic Simulation Algorithm on MIC coprocessors | Tangherloni, Andrea; Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Mauri, Giancarlo | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
10-mag-2017 | LASSIE: simulating large-scale models of biochemical systems on GPUs | Tangherloni, Andrea; Nobile, Marco S.; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2018 | Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization | Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Colombo, Riccardo; Mauri, Giancarlo; Pasi, Gabriella | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2018 | Computational Intelligence for Parameter Estimation of Biochemical Systems | Nobile, Marco S.; Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2018 | GPU-Powered Multi-Swarm Parameter Estimation of Biological Systems: A Master-Slave Approach | Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Cazzaniga, Paolo; Nobile, Marco S. | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2019 | GPU Accelerated Analysis of Treg-Teff Cross Regulation in Relapsing-Remitting Multiple Sclerosis | Beccuti, Marco; Cazzaniga, Paolo; Pennisi, Marzio; Besozzi, Daniela; Nobile, Marco S.; Pernice, Simone; Russo, Giulia; Tangherloni, Andrea; Pappalardo, Francesco | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2019 | High Performance Computing for Haplotyping: Models and Platforms | Tangherloni, Andrea; Rundo, Leonardo; Spolaor, Simone; Nobile, Marco S.; Merelli, Ivan; Besozzi, Daniela; Mauri, Giancarlo; Cazzaniga, Paolo; Liò, Pietro | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2019 | HaraliCU: GPU-powered Haralick feature extraction on medical images exploiting the full dynamics of gray-scale levels | Rundo, Leonardo; Tangherloni, Andrea; Galimberti, Simone; Cazzaniga, Paolo; Woitek, Ramona; Sala, Evis; Nobile, Marco S.; Mauri, Giancarlo | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations | |
1-gen-2019 | Biochemical parameter estimation vs. benchmark functions: A comparative study of optimization performance and representation design | Tangherloni, Andrea; Spolaor, Simone; Cazzaniga, Paolo; Besozzi, Daniela; Rundo, Leonardo; Mauri, Giancarlo; Nobile, Marco S. | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2019 | Modeling cell proliferation in human acute myeloid leukemia xenografts | Nobile, Marco S.; Vlachou, Thalia; Spolaor, Simone; Bossi, Daniela; Cazzaniga, Paolo; Lanfrancone, Luisa; Mauri, Giancarlo; Pelicci, Pier Giuseppe; Besozzi, Daniela | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2019 | ginSODA: massive parallel integration of stiff ODE systems on GPUs | Nobile, Marco S.; Cazzaniga, Paolo; Besozzi, Daniela; Mauri, Giancarlo | 1.1 Contributi in rivista - Journal contributions::1.1.01 Articoli/Saggi in rivista - Journal Articles/Essays | |
1-gen-2019 | Dilation Functions in Global Optimization | Nobile, Marco S.; Cazzaniga, Paolo; Ashlock, Daniel A. | 1.4 Contributi in atti di convegno - Contributions in conference proceedings::1.4.01 Contributi in atti di convegno - Conference presentations |
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